Information for motif21


Reverse Opposite:

p-value:1e-177
log p-value:-4.088e+02
Information Content per bp:1.945
Number of Target Sequences with motif439.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif40.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets100.0 +/- 55.4bp
Average Position of motif in Background92.5 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0524.1_TFAP2C/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTGCGGC----
TGCCCTGGGGCNANN

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCTGCGGC
-NGCTN----

MA0003.2_TFAP2A/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTGCGGC----
TGCCCTGAGGCANTN

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGCTGCGGC
--GCTGTG--

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGCTGCGGC
--GCTCCG--

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGCTGCGGC
ATGCCCTGAGGC

MA0146.2_Zfx/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGCGGC---
GGGGCCGAGGCCTG

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGGCTGCGGC
TGGGTGTGGC

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGCTGCGGC
TGGGTGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGCTGCGGC
DGGGYGKGGC