Information for motif4


Reverse Opposite:

p-value:1e-1001
log p-value:-2.307e+03
Information Content per bp:1.795
Number of Target Sequences with motif503.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.4 +/- 52.3bp
Average Position of motif in Background171.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGGTCGC
CAGGCCNNGGCCNN

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGCCGCGGTCGC---
-TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCGCGGTCGC-
CCCCCGCCCCCGCC

MA0506.1_NRF1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGCCGCGGTCGC-
--GCGCCTGCGCA

MA0469.1_E2F3/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGCCGCGGTCGC--
CTCCCGCCCCCACTC

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGCGGTCGC-
NTNGCCTCAGGCNNN

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGCCGCGGTCGC
-GGCGCGCT---

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGCCGCGGTCGC-
-YCCGCCCACGCN

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GGCCGCGGTCGC-
ATTGCCTCAGGCAAT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GGCCGCGGTCGC--
--GCGCATGCGCAG