Information for motif6


Reverse Opposite:

p-value:1e-797
log p-value:-1.835e+03
Information Content per bp:1.681
Number of Target Sequences with motif824.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets97.0 +/- 55.9bp
Average Position of motif in Background65.4 +/- 147.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ATGGCGACCG
CAAGATGGCGGC--

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATGGCGACCG
--GGCGCGCT

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGGCGACCG--
ATAAGGGCGCGCGAT

MA0095.2_YY1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATGGCGACCG
CAAGATGGCGGC--

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATGGCGACCG--
ATAAAGGCGCGCGAT

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGCGACCG
TTGCCATGGCAACN-

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ATGGCGACCG
GTTGCCATGGCAACCG

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCGACCG---
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCGACCG---
NNNNTTGGCGCCGANNN

MA0600.1_RFX2/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATGGCGACCG---
GTTGCCATGGCAACCGCGG