Information for motif7


Reverse Opposite:

p-value:1e-762
log p-value:-1.755e+03
Information Content per bp:1.583
Number of Target Sequences with motif5498.0
Percentage of Target Sequences with motif10.68%
Number of Background Sequences with motif1182.9
Percentage of Background Sequences with motif4.40%
Average Position of motif in Targets96.9 +/- 54.0bp
Average Position of motif in Background96.6 +/- 111.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0139.1_CTCF/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------CCCCYABTGG---
TAGCGCCCCCTGGTGGCCA

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.75
Offset:-9
Orientation:forward strand
Alignment:---------CCCCYABTGG-
CNNBRGCGCCCCCTGSTGGC

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CCCCYABTGG---
ANAGTGCCACCTGGTGGCCA

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCCCYABTGG--
--CCGATTGGCT

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCCCYABTGG-
CCCCCTGCTGTG

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCCYABTGG---
CCCCCCCGGGGGNN

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCCYABTGG----
TCNCCTGCTGNGNNN

MA0161.1_NFIC/Jaspar

Match Rank:8
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CCCCYABTGG--
------TTGGCA

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCCYABTGG---
ACCCCCCCGGGGGGN

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCCYABTGG----
TNTCCTGCTGTGNNG