Information for motif1


Reverse Opposite:

p-value:1e-2662
log p-value:-6.131e+03
Information Content per bp:1.774
Number of Target Sequences with motif5486.0
Percentage of Target Sequences with motif12.74%
Number of Background Sequences with motif432.3
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets100.8 +/- 53.2bp
Average Position of motif in Background90.4 +/- 215.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGRSCC
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGRSCC-
AGGGGGCGGGGCTG

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGRSCC
GGGNGGGGGCGGGGC-

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGRSCC
GGGGGCGGGGC-

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGRSCC--
NNAGGGGCGGGGTNNA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGRSCC
DGGGYGKGGC-

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGGRSCC
GGGGNGGGGC-

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GGGCGGRSCC
GGGCGGGACC

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGGCGGRSCC
TGGGTGGGGC-

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGRSCC--
CAAAGGCGTGGCCAG