Information for motif12


Reverse Opposite:

p-value:1e-417
log p-value:-9.619e+02
Information Content per bp:1.530
Number of Target Sequences with motif246.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.0 +/- 53.7bp
Average Position of motif in Background118.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAGGCGCCGCGC-
NNNNTTGGCGCCGANNN

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGGCGCCGCGC--
--GGCCCCGCCCCC

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGGCGCCGCGC-------
-----GCCGCGCAGTGCGT

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAGGCGCCGCGC-
NNNNTTGGCGCCGANNN

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGGCGCCGCGC
--GGTCCCGCCC

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGGCGCCGCGC
AGCAACAGCCGCACC--

MA0506.1_NRF1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CAGGCGCCGCGC
TGCGCAGGCGC-----

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGGCGCCGCGC
GCGCATGCGCAG---

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CAGGCGCCGCGC--
CAGGCCNNGGCCNN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCGCCGCGC
NNCAGGTGNN----