Information for motif17


Reverse Opposite:

p-value:1e-287
log p-value:-6.614e+02
Information Content per bp:1.530
Number of Target Sequences with motif237.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets98.7 +/- 51.8bp
Average Position of motif in Background117.6 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCCGCGGCGGG-----
NAGANTGGCGGGGNGNA

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTCCGCGGCGGG
NNGCNCTGCGCGGC---

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCCGCGGCGGG
CACCCCCGGGGGGG

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCCGCGGCGGG--
CCCCCCCGGGGGGGT

MA0470.1_E2F4/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTCCGCGGCGGG----
-----GGGCGGGAAGG

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCCGCGGCGGG---
---GGGGGCGGGGCC

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGCGGCGGG-
ACCCCCCCGGGGGGN

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCGGCGGG----
NNTNNGGGGCGGNGNGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGCGGCGGG---
NNTNAGGGGCGGNNNN

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCCGCGGCGGG--
---GGGGGCGGGGC