Information for motif18


Reverse Opposite:

p-value:1e-224
log p-value:-5.168e+02
Information Content per bp:1.600
Number of Target Sequences with motif4560.0
Percentage of Target Sequences with motif10.59%
Number of Background Sequences with motif1498.8
Percentage of Background Sequences with motif6.47%
Average Position of motif in Targets100.5 +/- 56.1bp
Average Position of motif in Background91.5 +/- 190.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0025.1_Dmbx1/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CGGATTAC----
TGAACCGGATTAATGAA

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CGGATTAC--
AAAAACGGATTATTG

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CGGATTAC-
TTGCCCGGATTAGG

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CGGATTAC-
-GGATTAGC

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CGGATTAC-----
NNAAGGGATTAACGANT

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGGATTAC
NGGGATTA-

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----CGGATTAC---
CGTTGGGGATTAGCCT

PH0129.1_Otx1/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CGGATTAC-----
AGAGGGGATTAATTTAT

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CGGATTAC-----
TGAAGGGATTAATCATC

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGGATTAC-----
TGTAGGGATTAATTGTC