Information for motif19


Reverse Opposite:

p-value:1e-188
log p-value:-4.339e+02
Information Content per bp:1.530
Number of Target Sequences with motif174.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets101.3 +/- 59.4bp
Average Position of motif in Background80.3 +/- 40.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTAGCGCGT-
NNGCNCTGCGCGGC

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CGTAGCGCGT
NNNTTAGGTAGCNTNT

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CGTAGCGCGT
NNTGTAGGTAGCANNT

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTAGCGCGT
CGGAGC----

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGTAGCGCGT-
-----TGCGTG

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGTAGCGCGT------
NNNTNGGGCGTATNNTN

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGTAGCGCGT------
-NTCGCGCGCCTTNNN

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGTAGCGCGT-
---BGCACGTA

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGTAGCGCGT----
----GCACGTACCC

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGTAGCGCGT--
----GCACGTNC