Information for motif2


Reverse Opposite:

p-value:1e-1695
log p-value:-3.903e+03
Information Content per bp:1.734
Number of Target Sequences with motif10141.0
Percentage of Target Sequences with motif23.54%
Number of Background Sequences with motif2121.3
Percentage of Background Sequences with motif9.16%
Average Position of motif in Targets99.0 +/- 52.6bp
Average Position of motif in Background101.1 +/- 76.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TNBTGTTTRC--
NYYTGTTTACHN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:2
Score:0.94
Offset:2
Orientation:forward strand
Alignment:TNBTGTTTRC
--CTGTTTAC

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:TNBTGTTTRC
--ATGTTTAC

MA0593.1_FOXP2/Jaspar

Match Rank:4
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:TNBTGTTTRC--
-TNTGTTTACTT

MA0480.1_Foxo1/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:TNBTGTTTRC-
TCCTGTTTACA

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.92
Offset:3
Orientation:reverse strand
Alignment:TNBTGTTTRC-
---TGTTTACA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.90
Offset:3
Orientation:reverse strand
Alignment:TNBTGTTTRC---
---TGTTTACTTT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TNBTGTTTRC---
-CNTGTTTACATA

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.89
Offset:3
Orientation:reverse strand
Alignment:TNBTGTTTRC---
---TGTTTACTTT

MA0148.3_FOXA1/Jaspar

Match Rank:10
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-TNBTGTTTRC----
TCCATGTTTACTTTG