Information for motif21


Reverse Opposite:

p-value:1e-160
log p-value:-3.695e+02
Information Content per bp:1.530
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.9 +/- 58.1bp
Average Position of motif in Background123.4 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACGCTCGG----
ACCACTCTCGGTCAC

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACGCTCGG----
AGTATTCTCGGTTGC

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACGCTCGG
--GCTCCG

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACGCTCGG
-NGCTN--

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACGCTCGG----
NNAATTCTCGNTNAN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACGCTCGG
CACGCA---

MA0014.2_PAX5/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---ACGCTCGG--------
GTCACGCTTGGCTGCNCNN

PAX5(Paired/Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACGCTCGG----
NGTCACGCTTGGCTGC

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ACGCTCGG---
AAGCATACGCCCAACTT

MA0164.1_Nr2e3/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACGCTCGG
AAGCTTG-