Information for motif23


Reverse Opposite:

p-value:1e-81
log p-value:-1.879e+02
Information Content per bp:1.530
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.9 +/- 60.7bp
Average Position of motif in Background58.0 +/- 43.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0131.1_HINFP/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGGACGGT-
GCGGACGTTN

MA0028.1_ELK1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGGACGGT
GAGCCGGAAG--

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGGACGGT
CCAGACAG-

MF0001.1_ETS_class/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGACGGT
ACCGGAAG--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGACGGT-
CCAGACRSVB

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGGACGGT--
--GGCVGTTR

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGACGGT------
NNNNTAACGGTTNNNAN

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGACGGT
ANCCGGAAGT-

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGACGGT
RCCGGAAGTD

PB0046.1_Mybl1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGGACGGT------
NNANTAACGGTTNNNAN