Information for motif6


Reverse Opposite:

p-value:1e-788
log p-value:-1.815e+03
Information Content per bp:1.794
Number of Target Sequences with motif470.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.9 +/- 53.5bp
Average Position of motif in Background164.3 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TGCGGCCGCGCG
-GCGCCTGCGCA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TGCGGCCGCGCG
CTGCGCATGCGC-

NRF1/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCGGCCGCGCG
GTGCGCATGCGC-

MA0048.1_NHLH1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGCCGCGCG
NCGCAGCTGCGN-

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCGGCCGCGCG-----
-NCANGCGCGCGCGCCA

POL011.1_XCPE1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGCGGCCGCGCG
-GGTCCCGCCC-

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGCGGCCGCGCG--
TCCGCCCCCGCATT

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCGGCCGCGCG
YCCGCCCACGCN

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGCCGCGCG--
NNGTGNGGGCGGGAG

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCGGCCGCGCG--
GGCGGGGGCGGGGG