Information for motif7


Reverse Opposite:

p-value:1e-577
log p-value:-1.329e+03
Information Content per bp:1.432
Number of Target Sequences with motif604.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif14.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets101.0 +/- 54.3bp
Average Position of motif in Background105.4 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGYSRCGT
ACGTCA---

PB0179.1_Sp100_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGYSRCGT-----
TCCGTCGCTTAAAAG

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CGYSRCGT
CGGTGACGTCAC--

MA0018.2_CREB1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGYSRCGT
TGACGTCA---

MA0067.1_Pax2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGYSRCGT
AGTCACGC

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGYSRCGT
TACGTGCV--

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGYSRCGT
TCACGTGACC-

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CGYSRCGT--
GAGTGTACGTAAGATGG

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CGYSRCGT--
TACGCCCCGCCACTCTG

PB0131.1_Gmeb1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CGYSRCGT-
TNAACGACGTCGNCCA