Information for motif8


Reverse Opposite:

p-value:1e-536
log p-value:-1.236e+03
Information Content per bp:1.542
Number of Target Sequences with motif12276.0
Percentage of Target Sequences with motif28.50%
Number of Background Sequences with motif4319.1
Percentage of Background Sequences with motif18.65%
Average Position of motif in Targets98.9 +/- 54.8bp
Average Position of motif in Background100.6 +/- 120.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0098.1_Lhx8/Jaspar

Match Rank:1
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
CACCGCTAATTAGNNGN

PH0097.1_Lhx6_2/Jaspar

Match Rank:2
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
NNNCGCTAATTAGNNGA

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---CGCTAATTAG----
CACCGCTAATTAGCGGT

PH0034.1_Gbx2/Jaspar

Match Rank:4
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
AANCGCTAATTAGCNNN

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
NNNCACTAATTAGTNNT

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
NTTCGCTAATTAGCTNT

PH0027.1_Emx2/Jaspar

Match Rank:7
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
NNCCACTAATTAGNNNT

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--CGCTAATTAG----
ACTCCTAATTAGTCGT

PH0131.1_Pax4/Jaspar

Match Rank:9
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
NNGNGCTAATTAGNTNA

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAATTAG----
NNNNNCTAATTAGTTTA