Information for motif9


Reverse Opposite:

p-value:1e-530
log p-value:-1.222e+03
Information Content per bp:1.797
Number of Target Sequences with motif344.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.5 +/- 52.1bp
Average Position of motif in Background131.5 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ANGGCCGCCG----
CAGGCCNNGGCCNN

MA0131.1_HINFP/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ANGGCCGCCG
TAACGTCCGC--

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ANGGCCGCCG
CAAGATGGCGGC--

MA0095.2_YY1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ANGGCCGCCG
CAAGATGGCGGC--

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ANGGCCGCCG
-AGGCCTAG-

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ANGGCCGCCG----
NNAGGGGCGGGGTNNA

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ANGGCCGCCG
--GGCGCGCT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ANGGCCGCCG-----
ANTGCCTGAGGCAAN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ANGGCCGCCG
-AGGCCTNG-

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ANGGCCGCCG----
NNNAAGGGGGCGGGNNN