Information for motif12


Reverse Opposite:

p-value:1e-53
log p-value:-1.238e+02
Information Content per bp:1.714
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.5 +/- 52.5bp
Average Position of motif in Background144.6 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CCGGGGGCGTGG----
NNAGGGGCGGGGTNNA

MA0039.2_Klf4/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:forward strand
Alignment:CCGGGGGCGTGG-
---TGGGTGGGGC

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:CCGGGGGCGTGG-
---GGGGNGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.75
Offset:3
Orientation:forward strand
Alignment:CCGGGGGCGTGG-
---DGGGYGKGGC

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCGGGGGCGTGG--
--GGGGGCGGGGCC

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCGGGGGCGTGG-
--GGGGGCGGGGC

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGGGCGTGG--
NNNAAGGGGGCGGGNNN

MA0162.2_EGR1/Jaspar

Match Rank:8
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGGGCGTGG-
GGCGGGGGCGGGGG

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CCGGGGGCGTGG--
---TGGGTGTGGCN

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCGGGGGCGTGG---
-AGGGGGCGGGGCTG