Information for motif13


Reverse Opposite:

p-value:1e-47
log p-value:-1.101e+02
Information Content per bp:1.647
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets107.7 +/- 51.1bp
Average Position of motif in Background9.9 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGACTCCGCCC--
--GGCCCCGCCCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGGACTCCGCCC----
TCGACCCCGCCCCTAT

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGACTCCGCCC
GGGGATTCCCCC-

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGGACTCCGCCC---
-NAGCCCCGCCCCCN

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGACTCCGCCC-
---GCCCCGCCCC

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGACTCCGCCC--
---GCCCCGCCCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GGGACTCCGCCC
----CCCCCCCC

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGACTCCGCCC--
TACGAGACTCCTCTAAC

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGACTCCGCCC-
---GCCCCACCCA

MA0516.1_SP2/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGACTCCGCCC------
---GCCCCGCCCCCTCCC