Information for motif15


Reverse Opposite:

p-value:1e-44
log p-value:-1.025e+02
Information Content per bp:1.704
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.1 +/- 46.4bp
Average Position of motif in Background108.5 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTGAAGAGCCT
-CTYRAGTGSY-

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTGAAGAGCCT
--TTGAGTGSTT

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GTTGAAGAGCCT
------CAGCC-

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAGAGCCT--
AANTTCAAGTGGCTTN

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAGAGCCT--
AATTTCAAGTGGCTTN

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTGAAGAGCCT----
NTNNNAGGAGTCTCNTN

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTGAAGAGCCT-
NAATTTTACGAGNTNN

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTTGAAGAGCCT-
ANATTTTACGAGNNNN

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTTGAAGAGCCT--
AAATTCAAGTGGNTTN

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTTGAAGAGCCT
--NGAAGC----