Information for motif18


Reverse Opposite:

p-value:1e-35
log p-value:-8.074e+01
Information Content per bp:1.956
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.3 +/- 53.4bp
Average Position of motif in Background108.9 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:TGTAGCAGGA---
---ANCAGGATGT

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTAGCAGGA---
---NACAGGAAAT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTAGCAGGA----
----ACAGGAAGTG

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGTAGCAGGA---
---AVCAGGAAGT

MA0098.2_Ets1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTAGCAGGA------
-NNNACAGGAAGTGGN

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTAGCAGGA---
---AACAGGAAGT

MA0474.1_Erg/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTAGCAGGA-----
----ACAGGAAGTGG

MA0475.1_FLI1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGTAGCAGGA-----
----ACAGGAAGTGG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGTAGCAGGA---
---NACAGGAAAT

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGTAGCAGGA---
---GGCGGGAARN