Information for motif24


Reverse Opposite:

p-value:1e-28
log p-value:-6.588e+01
Information Content per bp:1.530
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.6 +/- 58.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGCGT-
GGGGCCGAGGCCTG

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCGGCGT---
---GGCGCGCT

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCCGGCGT-
---TGCGTG

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCGGCGT---
CCCCCCCGGGGGGGT

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CCCGGCGT--
ACCCCCCCGGGGGGN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CCCGGCGT-
NNNNTGACCCGGCGCG

PB0179.1_Sp100_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCGGCGT-------
TCCGTCGCTTAAAAG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCCGGCGT
CNAGGCCT

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGCGT----
TACGCCCCGCCACTCTG

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCCGGCGT
NNTTCCCGCCC-