Information for motif29


Reverse Opposite:

p-value:1e-24
log p-value:-5.684e+01
Information Content per bp:1.483
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets96.8 +/- 51.3bp
Average Position of motif in Background101.8 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:CAGCTGTTGTTA
CAGCTGTT----

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTTGTTA
ACAGCTGTTV---

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGTTGTTA
NCAGCTGCTG---

MA0521.1_Tcf12/Jaspar

Match Rank:4
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTTGTTA
NNGCAGCTGTT----

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGTTGTTA
AGCAGCTGCTNN--

MA0499.1_Myod1/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGTTGTTA
TGCAGCTGTCCCT-

MA0500.1_Myog/Jaspar

Match Rank:7
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTTGTTA
NNGCAGCTGTC----

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTTGTTA
HCAGCTGDTN---

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGTTGTTA
ACAGCTGTTN---

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CAGCTGTTGTTA
CAGCTGNT----