Information for motif30


Reverse Opposite:

p-value:1e-24
log p-value:-5.545e+01
Information Content per bp:1.906
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets102.8 +/- 52.5bp
Average Position of motif in Background61.7 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCGCT-----
NNNNTTGGCGCCGANNN

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCGCT-----
NNNNTTGGCGCCGANNN

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TAGGCGCT--
--GGCGCGCT

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAGGCGCT----
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAGGCGCT----
ATAAGGGCGCGCGAT

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGGCGCT-----
CAAAGGCGTGGCCAG

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TAGGCGCT---
TGCGCATAGGGGAGGAG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCGCT
CTAGGCCT-

PB0143.1_Klf7_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TAGGCGCT----
AAGCATACGCCCAACTT

MA0506.1_NRF1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCGCT
TGCGCAGGCGC-