Information for motif31


Reverse Opposite:

p-value:1e-22
log p-value:-5.199e+01
Information Content per bp:1.698
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets97.8 +/- 51.5bp
Average Position of motif in Background69.0 +/- 41.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0516.1_SP2/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGCCGGCCT
GGGNGGGGGCGGGGC-

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGGCCT
CTAGGCCT----

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGGCCT
GGGGGCGGGGCC

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCCGGCCT
GGGAGGACNG---

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGGCCGGCCT
--AGGCCTNG--

MA0146.2_Zfx/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCCGGCCT-
GGGGCCGAGGCCTG

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCCGGCCT-
AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGGCCT
GGGGGCGGGGC-

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGCCGGCCT-
TGGCAGNCTGCCAG

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGGCCT---
NNGGCCACGCCTTTN