Information for motif8


Reverse Opposite:

p-value:1e-78
log p-value:-1.802e+02
Information Content per bp:1.537
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets94.3 +/- 54.0bp
Average Position of motif in Background51.0 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0002.1_Arid5a_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:YAAATATTTACM--
CTAATATTGCTAAA

MA0153.1_HNF1B/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YAAATATTTACM
TTAATATTTAAC

MA0046.1_HNF1A/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--YAAATATTTACM
GNTAATNATTAACC

MA0031.1_FOXD1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YAAATATTTACM
---ATGTTTAC-

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:YAAATATTTACM-
TTAATGTTTAACC

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:YAAATATTTACM
----TGTTTACA

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:YAAATATTTACM----
----TGTTTACTTAGG

MA0148.3_FOXA1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YAAATATTTACM---
TCCATGTTTACTTTG

MA0164.1_Nr2e3/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YAAATATTTACM
--AAGCTTG---

MA0041.1_Foxd3/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---YAAATATTTACM
AAACAAACATTC---