Information for motif9


Reverse Opposite:

p-value:1e-68
log p-value:-1.571e+02
Information Content per bp:1.873
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.7 +/- 59.0bp
Average Position of motif in Background118.6 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---KCTGTGTACACA--
NNNVCTGWGYAAACASN

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--KCTGTGTACACA---
TACATGTGCACATAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--KCTGTGTACACA---
CAGATGTGCACATACGT

MA0047.2_Foxa2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:KCTGTGTACACA
NCTAAGTAAACA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:KCTGTGTACACA
CNTGTTTACATA

MA0148.3_FOXA1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:KCTGTGTACACA----
-CAAAGTAAACANNNN

MA0157.1_FOXO3/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KCTGTGTACACA
--TGTTTACA--

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:KCTGTGTACACA
-CTGTTTAC---

MA0480.1_Foxo1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KCTGTGTACACA
TCCTGTTTACA--

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:KCTGTGTACACA
TNTGTTTACTT-