Information for motif10


Reverse Opposite:

p-value:1e-61
log p-value:-1.406e+02
Information Content per bp:1.794
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets98.0 +/- 48.3bp
Average Position of motif in Background34.9 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0138.2_REST/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CACCMCGGACAG----
TTCAGCACCATGGACAGCGCC

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CACCMCGGACAG----
TCAGCACCATGGACAGCTCC

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CACCMCGGACAG
--CCAGGAACAG

MA0592.1_ESRRA/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CACCMCGGACAG-
--CCAAGGTCACA

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CACCMCGGACAG
--CAAAGGTCAG

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACCMCGGACAG
-BTCAAGGTCA-

MA0071.1_RORA_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CACCMCGGACAG
-ATCAAGGTCA-

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACCMCGGACAG
--TCAAGGTCAN

MA0155.1_INSM1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACCMCGGACAG
CGCCCCCTGACA-

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACCMCGGACAG
-----AGGTCA-