Information for motif11


Reverse Opposite:

p-value:1e-60
log p-value:-1.401e+02
Information Content per bp:1.515
Number of Target Sequences with motif459.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif148.7
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets102.5 +/- 55.2bp
Average Position of motif in Background104.1 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----AWCAAAGGCC--
NNNAGATCAAAGGANNN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AWCAAAGGCC
ACATCAAAGG--

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--AWCAAAGGCC
ACATCAAAGGNA

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----AWCAAAGGCC--
NANAGATCAAAGGGNNN

MA0523.1_TCF7L2/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----AWCAAAGGCC
AAAGATCAAAGGAA

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AWCAAAGGCC--
AGAAGAACAAAGGACTA

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AWCAAAGGCC--
TATAGATCAAAGGAAAA

MA0514.1_Sox3/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AWCAAAGGCC
AAAACAAAGG--

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:9
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AWCAAAGGCC
ACWTCAAAGG--

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AWCAAAGGCC--
TATAGATCAAAGGAAAA