Information for motif12


Reverse Opposite:

p-value:1e-57
log p-value:-1.333e+02
Information Content per bp:1.711
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets100.0 +/- 58.4bp
Average Position of motif in Background116.2 +/- 72.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0009.1_T/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:ACCTTGGTGTGA-
--CTAGGTGTGAA

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:ACCTTGGTGTGA-
---ATGGGGTGAT

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ACCTTGGTGTGA-
---ATGGGGTGAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACCTTGGTGTGA---
---GTGGCGTGACNG

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACCTTGGTGTGA-
---GTGGGGTGAT

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ACCTTGGTGTGA--
----AGGTGTGAAM

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACCTTGGTGTGA-----
GAAAAGGTGTGAAAATT

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACCTTGGTGTGA
NGTGACCTTGG-----

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTGGTGTGA-
NNNCCATTGTGTNAN

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACCTTGGTGTGA---
GTNTTGTTGTGANNT