Information for motif15


Reverse Opposite:

p-value:1e-48
log p-value:-1.118e+02
Information Content per bp:1.547
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 58.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0024.2_E2F1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTTGCCGCG--
-CCTCCCGCCCN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGCCGCG---
NCCGTTGCTANGNGN

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGCCGCG---
NNCGTTGCTATGGNN

MA0470.1_E2F4/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTGCCGCG-
NNTTCCCGCCC

MA0048.1_NHLH1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGTTGCCGCG-
GCGCAGCTGCGT

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTTGCCGCG
NYTTCCCGCC

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTTGCCGCG-
-GGTCCCGCCC

MA0509.1_Rfx1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGTTGCCGCG-----
-GTTGCCATGGNAAC

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTTGCCGCG-
CTGTTGCTAGGS

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CGTTGCCGCG--------
----GCCGCGCAGTGCGT