Information for motif16


Reverse Opposite:

p-value:1e-47
log p-value:-1.099e+02
Information Content per bp:1.903
Number of Target Sequences with motif664.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif278.5
Percentage of Background Sequences with motif2.59%
Average Position of motif in Targets97.6 +/- 55.2bp
Average Position of motif in Background98.0 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---CYATTGTS----
NNNCCATTGTGTNAN

MA0078.1_Sox17/Jaspar

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-CYATTGTS
CTCATTGTC

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CYATTGTS
CCWTTGTY

MA0077.1_SOX9/Jaspar

Match Rank:4
Score:0.87
Offset:0
Orientation:forward strand
Alignment:CYATTGTS-
CCATTGTTC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.86
Offset:0
Orientation:forward strand
Alignment:CYATTGTS--
CCATTGTTNY

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CYATTGTS-
NCCATTGTTC

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----CYATTGTS----
TGTTCCCATTGTGTACT

MA0143.3_Sox2/Jaspar

Match Rank:8
Score:0.84
Offset:0
Orientation:forward strand
Alignment:CYATTGTS
CCTTTGTT

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CYATTGTS------
CNNNTATTGTTCNNNNN

MA0515.1_Sox6/Jaspar

Match Rank:10
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CYATTGTS--
CCATTGTTTT