Information for motif2


Reverse Opposite:

p-value:1e-396
log p-value:-9.124e+02
Information Content per bp:1.654
Number of Target Sequences with motif2958.0
Percentage of Target Sequences with motif21.31%
Number of Background Sequences with motif995.3
Percentage of Background Sequences with motif9.27%
Average Position of motif in Targets100.8 +/- 53.2bp
Average Position of motif in Background102.0 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0031.1_FOXD1/Jaspar

Match Rank:1
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:YTGTTTAC
ATGTTTAC

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:2
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--YTGTTTAC--
NYYTGTTTACHN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:YTGTTTAC
CTGTTTAC

MA0593.1_FOXP2/Jaspar

Match Rank:4
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-YTGTTTAC--
TNTGTTTACTT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-YTGTTTAC---
CNTGTTTACATA

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:YTGTTTAC-
-TGTTTACA

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--YTGTTTAC-
TCCTGTTTACA

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:YTGTTTAC---
-TGTTTACTTT

MA0148.3_FOXA1/Jaspar

Match Rank:9
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---YTGTTTAC----
TCCATGTTTACTTTG

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:YTGTTTAC---
-TGTTTACTTT