Information for motif20


Reverse Opposite:

p-value:1e-42
log p-value:-9.793e+01
Information Content per bp:1.530
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets95.2 +/- 61.0bp
Average Position of motif in Background148.2 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0599.1_KLF5/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTGGGCGGAGA
--GGGGNGGGGC

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGGCGGAGA---
NNNTNGGGCGTATNNTN

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTGGGCGGAGA
-GGGGGCGGGGC

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGGCGGAGA--
NNTNNGGGGCGGNGNGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGGCGGAGA-
NNTNAGGGGCGGNNNN

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTGGGCGGAGA
--TGGGTGGGGC

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTGGGCGGAGA--
AGGGGGCGGGGCTG

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGGGCGGAGA-
-GGGGGCGGGGCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCTGGGCGGAGA
---GGGGGGGG-

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGCGGAGA---
NATNGGGNGGGGANAN