Information for motif21


Reverse Opposite:

p-value:1e-41
log p-value:-9.476e+01
Information Content per bp:1.454
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets93.8 +/- 54.8bp
Average Position of motif in Background101.5 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGGAGCCC
GGGGGCGGGGCC-

MA0079.3_SP1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGGAGCCC
GGGGGCGGGGC--

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGAGCGGAGCCC
AGGGGGCGGGGCTG

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGAGCGGAGCCC
----CGGAGC--

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCGGAGCCC
GGGNGGGGGCGGGGC--

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGCGGAGCCC
GGGGNGGGGC--

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCGGAGCCC
NNTNNGGGGCGGNGNGN

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCGGAGCCC
NNTNAGGGGCGGNNNN-

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGCGGAGCCC----
NNNGGGGCGCCCCCNN

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCGGAGCCC-
NNAGGGGCGGGGTNNA