Information for motif22


Reverse Opposite:

p-value:1e-41
log p-value:-9.452e+01
Information Content per bp:1.907
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.8 +/- 56.8bp
Average Position of motif in Background174.2 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAACCGGTT-----------
-AAACYKGTTWDACMRGTTTB

BMYB(HTH)/Hela-BMYB-ChIPSeq(GSE27030)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAACCGGTT
NHAACBGYYV

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAAACCGGTT
--AACCGANA

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAAACCGGTT----
TTGAAAACCGTTAATTT

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAACCGGTT----
ATGGAAACCGTTATTTT

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAAACCGGTT----
AANNATCCGGATGTNN

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:-10
Orientation:forward strand
Alignment:----------CAAACCGGTT
NAAACCGGTTNNAACCGGTT

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAACCGGTT--
CNATAATCCGNTTNT

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAACCGGTT------
GAAAACTAGTTAACATC

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CAAACCGGTT--
NNNATTAATCCGNTTNA