Information for motif23


Reverse Opposite:

p-value:1e-38
log p-value:-8.977e+01
Information Content per bp:1.475
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.2 +/- 54.4bp
Average Position of motif in Background82.4 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCGCGYT---
NTCGCGCGCCTTNNN

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCGCGYT-
NCANGCGCGCGCGCCA

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCGCGYT---
ANCGCGCGCCCTTNN

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TGAGCGCGYT
--GGCGCGCT

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGAGCGCGYT
-CAGCC----

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCGCGYT
CTTGAGTGGCT-

PB0039.1_Klf7_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGAGCGCGYT---
NNAGGGGCGGGGTNNA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGCGCGYT
--TGCGTG--

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGAGCGCGYT
TGCGTGGGYG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCGCGYT
TTGAGTGSTT-