Information for motif24


Reverse Opposite:

p-value:1e-37
log p-value:-8.611e+01
Information Content per bp:1.452
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets104.7 +/- 57.8bp
Average Position of motif in Background130.4 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0516.1_SP2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AGGCGGTACG
GGGNGGGGGCGGGGC-

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGGTACG--
NAGANTGGCGGGGNGNA

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGTACG----
GCTGGGGGGTACCCCTT

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGCGGTACG
CGGGCGGGAGG

MA0471.1_E2F6/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGCGGTACG-
GGGCGGGAAGG

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGGTACG
GGGGGCGGGGC-

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGGTACG
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGTACG-
AGGGGGCGGGGCTG

MA0470.1_E2F4/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGCGGTACG-
GGGCGGGAAGG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGCGGTACG
CWGGCGGGAA-