Information for motif25


Reverse Opposite:

p-value:1e-32
log p-value:-7.490e+01
Information Content per bp:1.530
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets110.5 +/- 55.0bp
Average Position of motif in Background160.4 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0102.1_Meis1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGACAGCTC---
NTATTGACAGCTNNTT

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGACAGCTC---
GTATTGACAGCTNNTT

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGACAGCTC---
GGATTGACAGGTCNTT

PH0104.1_Meis2/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGACAGCTC---
NTATTGACAGGTNNTN

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CTTTGACAGCTC---
GATATTGACAGCTGCGT

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGACAGCTC---
GTATTGACAGGTNNTT

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGACAGCTC---
NNATTGACAGGTGCTT

MA0498.1_Meis1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTTTGACAGCTC
NNNTGAGTGACAGCT-

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTTTGACAGCTC
---TGACACCT-

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTTGACAGCTC
-KTTCACACCT-