Information for motif27


Reverse Opposite:

p-value:1e-28
log p-value:-6.489e+01
Information Content per bp:1.902
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets94.9 +/- 59.3bp
Average Position of motif in Background101.6 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GATCGCGG-
CAAGATGGCGGC

MA0527.1_ZBTB33/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GATCGCGG---
NAGNTCTCGCGAGAN

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GATCGCGG----
ACCACTCTCGGTCAC

MA0095.2_YY1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GATCGCGG-
CAAGATGGCGGC

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GATCGCGG----
AGTATTCTCGGTTGC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GATCGCGG-----
---GGCGGGAAAH

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GATCGCGG-----
TGCGCATAGGGGAGGAG

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GATCGCGG------
NAGANTGGCGGGGNGNA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GATCGCGG------
--TGGCGGGAAAHB

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GATCGCGG-----
--GGGCGGGAAGG