Information for motif29


Reverse Opposite:

p-value:1e-17
log p-value:-3.934e+01
Information Content per bp:1.967
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets111.8 +/- 41.8bp
Average Position of motif in Background87.1 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0157.1_Rhox11_1/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TACACCGC---
TCNNTTTACAGCGNNNT

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TACACCGC---
TCNCTTTACAGCGNNNT

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACACCGC
TACTNNNN

MA0442.1_SOX10/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TACACCGC
-ACAAAG-

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TACACCGC---
ATAAATGACACCTATCA

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TACACCGC---
NNGGCGACACCTCNNN

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TACACCGC---
NNNNGGTACCCCCCANN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TACACCGC------
AATCGCACTGCATTCCG

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TACACCGC
--CACAGN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TACACCGC
TGACACCT-