Information for motif5


Reverse Opposite:

p-value:1e-77
log p-value:-1.785e+02
Information Content per bp:1.453
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.9 +/- 48.7bp
Average Position of motif in Background167.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCCCGGG
AGCAGCTGCTNN--

MA0510.1_RFX5/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGGCCCGGG--
NCTGTTGCCAGGGAG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGCGGCCCGGG
NCAGCTGCTG---

MA0500.1_Myog/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCCCGGG
GACAGCTGCAG---

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCCCGGG
CACAGCTGCAG---

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGCGGCCCGGG
CTCAGCAGCTGCTACTG

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGCGGCCCGGG
NNACAGCTGC-----

MA0499.1_Myod1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCGGCCCGGG
NGNGACAGCTGCN----

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGGCCCGGG
CACAGN--------

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCCCGGG
CAGCTGNT----