| p-value: | 1e-69 |
| log p-value: | -1.600e+02 |
| Information Content per bp: | 1.565 |
| Number of Target Sequences with motif | 2732.0 |
| Percentage of Target Sequences with motif | 19.68% |
| Number of Background Sequences with motif | 1524.8 |
| Percentage of Background Sequences with motif | 14.20% |
| Average Position of motif in Targets | 100.2 +/- 54.5bp |
| Average Position of motif in Background | 101.0 +/- 63.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.18 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
| Match Rank: | 1 |
| Score: | 0.92
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TAATTARC
TAATTAGN |
|
|
|
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 2 |
| Score: | 0.90
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---TAATTARC
ADBTAATTAR- |
|
|
|
MA0125.1_Nobox/Jaspar
| Match Rank: | 3 |
| Score: | 0.90
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TAATTARC
TAATTGGT |
|
|
|
PH0024.1_Dlx5/Jaspar
| Match Rank: | 4 |
| Score: | 0.90
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TAATTARC----
GGGGTAATTAGCTCTG |
|
|
|
PB0031.1_Hoxa3_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.89
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------TAATTARC
TGGAGGTAATTAAC |
|
|
|
PH0050.1_Hoxa3/Jaspar
| Match Rank: | 6 |
| Score: | 0.89
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TAATTARC----
ACTAATTANCNCNA |
|
|
|
PH0074.1_Hoxd1/Jaspar
| Match Rank: | 7 |
| Score: | 0.88
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----TAATTARC----
TAAACTAATTAGCTGTA |
|
|
|
PH0127.1_Nobox/Jaspar
| Match Rank: | 8 |
| Score: | 0.88
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------TAATTARC---
GNTNNCTAATTAGNNCG |
|
|
|
MA0075.1_Prrx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.88
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TAATTARC
TAATT--- |
|
|
|
PH0036.1_Gsx2/Jaspar
| Match Rank: | 10 |
| Score: | 0.87
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TAATTARC----
AGGTTAATTAGCTGAT |
|
|
|
