Information for motif13


Reverse Opposite:

p-value:1e-62
log p-value:-1.444e+02
Information Content per bp:1.819
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.1 +/- 47.9bp
Average Position of motif in Background111.9 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0100.2_Myb/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCTGACTGTCA
--CCAACTGCCA

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTCTGACTGTCA
--CCAACTGCCA

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCTGACTGTCA--
--NTGATTGACAGN

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCTGACTGTCA---
--CTGTCTGTCACCT

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCTGACTGTCA---
CGACCAACTGCCATGC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTGACTGTCA
TGCTGACTCA--

MA0060.2_NFYA/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TTCTGACTGTCA--
AGAGTGCTGATTGGTCCA

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TTCTGACTGTCA
TAAAAATGCTGACTT---

PB0194.1_Zbtb12_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCTGACTGTCA
AGNGTTCTAATGANN-

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTCTGACTGTCA---
---TGAGTGACAGSC