Information for motif2


Reverse Opposite:

p-value:1e-447
log p-value:-1.030e+03
Information Content per bp:1.664
Number of Target Sequences with motif6967.0
Percentage of Target Sequences with motif30.29%
Number of Background Sequences with motif4804.4
Percentage of Background Sequences with motif17.98%
Average Position of motif in Targets99.2 +/- 54.3bp
Average Position of motif in Background91.1 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.52
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NGGCCCCGCCCC--
NAGCCCCGCCCCCN

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NGGCCCCGCCCC-
-GGCCCCGCCCCC

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NGGCCCCGCCCC-
--GCCCCGCCCCC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NGGCCCCGCCCC
--GCCCCGCCCC

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.91
Offset:2
Orientation:forward strand
Alignment:NGGCCCCGCCCC-----
--GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:6
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NGGCCCCGCCCC
--GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.90
Offset:2
Orientation:reverse strand
Alignment:NGGCCCCGCCCC
--GCCMCRCCCH

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-NGGCCCCGCCCC---
TCGACCCCGCCCCTAT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.82
Offset:1
Orientation:forward strand
Alignment:NGGCCCCGCCCC-----
-ATCCCCGCCCCTAAAA

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:NGGCCCCGCCCC
-GGTCCCGCCC-