Information for motif21


Reverse Opposite:

p-value:1e-32
log p-value:-7.431e+01
Information Content per bp:1.870
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.3 +/- 49.3bp
Average Position of motif in Background130.9 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0099.2_JUN::FOS/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGATTCWAGC
TGAGTCA---

PH0014.1_Cphx/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGATTCWAGC--
NTTGATTNNATCAN

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGATTCWAGC----
ACATTCATGACACG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGATTCWAGC---
---TTCCCGCCWG

MA0038.1_Gfi1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGATTCWAGC
CNGTGATTTN---

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGATTCWAGC-
-NYTTCCCGCC

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGATTCWAGC
GATGAGTCAT--

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGATTCWAGC---
GACCACATTCATACAAT

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGATTCWAGC
NATGACTCATNN

MA0476.1_FOS/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGATTCWAGC
TGTGACTCATT-