Information for motif22


Reverse Opposite:

p-value:1e-28
log p-value:-6.676e+01
Information Content per bp:1.818
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.5 +/- 54.3bp
Average Position of motif in Background72.8 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GCTACATGCCTT
-NNACTTGCCTT

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCTACATGCCTT
ACTTGCTACCTACACC

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCTACATGCCTT
ACATGCTACCTAATAC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GCTACATGCCTT-
-----AGGCCTNG

MA0032.1_FOXC1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTACATGCCTT
--TACTNNNN--

MA0090.1_TEAD1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTACATGCCTT--
--CACATTCCTCCG

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCTACATGCCTT-
-----AGGCCTAG

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCTACATGCCTT
GGGTACGTGC---

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCTACATGCCTT
--TACGTGCV--

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCTACATGCCTT-
---RCATTCCWGG