Information for motif25


Reverse Opposite:

p-value:1e-19
log p-value:-4.537e+01
Information Content per bp:1.841
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.3 +/- 52.8bp
Average Position of motif in Background120.2 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TACATTCACG-----
-ACATTCATGACACG

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TACATTCACG----
GACCACATTCATACAAT

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TACATTCACG--
NNCATTCATTCATNNN

PB0171.1_Sox18_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TACATTCACG--
GGACTGAATTCATGCC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TACATTCACG-
-RCATTCCWGG

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TACATTCACG---
-ACTTTCACTTTC

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TACATTCACG--
CACATTCCTCCG

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TACATTCACG-----
AGTATTCTCGGTTGC

MA0067.1_Pax2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TACATTCACG-
---AGTCACGC

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TACATTCACG
TNGAATTTCATTNAN-