Information for motif7


Reverse Opposite:

p-value:1e-85
log p-value:-1.958e+02
Information Content per bp:1.491
Number of Target Sequences with motif2650.0
Percentage of Target Sequences with motif11.52%
Number of Background Sequences with motif2091.2
Percentage of Background Sequences with motif7.83%
Average Position of motif in Targets98.7 +/- 55.6bp
Average Position of motif in Background98.7 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:NCBCCTRBTG--
CCCCCTGCTGTG

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:NCBCCTRBTG-----
TNTCCTGCTGTGNNG

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:NCBCCTRBTG-----
TCNCCTGCTGNGNNN

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:NCBCCTRBTG-----
NNTCCTGCTGTGNNN

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------NCBCCTRBTG--
CNNBRGCGCCCCCTGSTGGC

MA0139.1_CTCF/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----NCBCCTRBTG----
TAGCGCCCCCTGGTGGCCA

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------NCBCCTRBTG----
ANAGTGCCACCTGGTGGCCA

MA0524.1_TFAP2C/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:NCBCCTRBTG-----
TGCCCTGGGGCNANN

MA0154.2_EBF1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:NCBCCTRBTG--
-TCCCTGGGGAN

POL002.1_INR/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:NCBCCTRBTG-
---NNNANTGA