Information for motif8


Reverse Opposite:

p-value:1e-76
log p-value:-1.758e+02
Information Content per bp:1.507
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.1 +/- 58.1bp
Average Position of motif in Background94.5 +/- 67.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0158.1_HOXA5/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTMACMCTAAKG
----CACTAATT

MA0132.1_Pdx1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CTMACMCTAAKG
------CTAATT

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CTMACMCTAAKG--
------CTAATKGV

MA0057.1_MZF1_5-13/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTMACMCTAAKG
TTCCCCCTAC--

MA0595.1_SREBF1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTMACMCTAAKG
ATCACCCCAC--

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTMACMCTAAKG---
CTCACACAATGGCGC

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTMACMCTAAKG-
-----GKTAATGR

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTMACMCTAAKG------
----CCTTAATNGNTTTT

MA0514.1_Sox3/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTMACMCTAAKG
--AAAACAAAGG

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTMACMCTAAKG
ATCACCCCAT--