Information for motif1


Reverse Opposite:

p-value:1e-642
log p-value:-1.480e+03
Information Content per bp:1.487
Number of Target Sequences with motif7464.0
Percentage of Target Sequences with motif33.07%
Number of Background Sequences with motif4888.0
Percentage of Background Sequences with motif17.99%
Average Position of motif in Targets99.5 +/- 54.2bp
Average Position of motif in Background97.3 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGATTGGCYN--
TGATTGGCTANN

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCYN
CCGATTGGCT-

MA0502.1_NFYB/Jaspar

Match Rank:3
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGGCYN----
CTGATTGGTCNATTT

MA0060.2_NFYA/Jaspar

Match Rank:4
Score:0.78
Offset:-7
Orientation:forward strand
Alignment:-------TGATTGGCYN-
AGAGTGCTGATTGGTCCA

MA0038.1_Gfi1/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TGATTGGCYN
CNGTGATTTN---

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------TGATTGGCYN-
NNNNGTTGATTGGGTCG

MA0125.1_Nobox/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGATTGGCYN
TAATTGGT--

MA0070.1_PBX1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGATTGGCYN
TTTGATTGATGN

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGATTGGCYN--
NNANTGATTGATNNNN

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TGATTGGCYN--
NNANTGATTGATNTTN